PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022934725.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 315aa MW: 35257.3 Da PI: 8.3908

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022934725.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.8	1.1e-32	129	182	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022934725.1 129 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 182 9****************************************************7 PP
2	Myb_DNA-binding	49	1.4e-15	130	181	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022934725.1 130 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 181 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MFDISSDGLQ PIKGIPVYHN RPFSFLGVDQ KDHYFHHQFP SSCFFPNYSN SNGVVQMGYH 60 HHRGIGGNNS SPRFNNGVVS IEAVKSLNYN NHSNYSNAAS SSSHVCSHGM MMRSRFLQKL 120 PAKRSMRAPR MRWTTSLHAR FVHAVEHLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY 180 RTVKTTDKPA ASSGQSDGSG EDEVSPTLGT ISGGHGPKQF SDQRAPPDRS GQQSPDLEFG 240 SSTLWSNSSR DVWAETNGNE MDVIRPSLYA KMQQKCMHQI QECDSGAMKK YNSECCNKPS 300 LEFRLGRAEW DVEEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-59	G2-like family protein