PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022934915.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 439aa    MW: 49386.8 Da    PI: 5.6413
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022934915.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.69.6e-34481392102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+++++ed++++ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++         weF++  F++gkk ll++
  XP_022934915.1  48 FLWKTFDLVEDPAIDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDTDR---------WEFANGAFQRGKKYLLKN 133
                     99***************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+ks
  XP_022934915.1 134 IQRRKS 139
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MSSSSAHYLF DVMLEPDIGA SDPFVLLCMG SDVPQPLECL HGQLVPPFLW KTFDLVEDPA  60
IDPIVSWGSA GQSFVVWDPV EFSRVILPSN FKHNNFSSFV RQLNTYGFRK IDTDRWEFAN  120
GAFQRGKKYL LKNIQRRKSP HSEQIGSLIG PSTGGGKSGL EDEIGKLKKE RSMLLQEVVE  180
LQQQHKGTAQ HVITVNRRLR SAEQRQKQMI TFLSKLLRNP ELLFLLKRKK EPKDIDSERI  240
KRKFVKQHKH EADGCTLSME GKIETAMDLN PSLFEGPSAY LMQGMESFPD SIPNFQLMNA  300
SSSDLIASEE LAFHDGIVKP REELRIEASK AIGSPDYFGS LAEDILQSSH HGTGCIIKPE  360
EIWNAYLNVD ASTPGSSNEL WSNPVGFEDQ FWQVSCRQSP IWDLGSQQAG DLGMDKWSAS  420
GFPFNDQDTQ AYPKNADQT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227246KRKKEPKDIDSERIKRKFVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.14e-82HSF family protein