PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935008.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 262aa    MW: 30023.2 Da    PI: 8.2947
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935008.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding445.1e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G ++W+++++  g+ R++k+c++rw +yl
   XP_022935008.1 14 RGPWTVEEDHKLMNFILNNGIHCWRLVPKLAGLLRCGKSCRLRWINYL 61
                     89******************************99************97 PP
2Myb_DNA-binding55.21.7e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+ E+ ++++++ +lG++ W++Ia++++ gRt++++k++w++
   XP_022935008.1  67 RGAFTETEENQIIHLHSLLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGRQPCCDKV GLKRGPWTVE EDHKLMNFIL NNGIHCWRLV PKLAGLLRCG KSCRLRWINY  60
LRPDLKRGAF TETEENQIIH LHSLLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKRLKQLG  120
LDPSTHKRLT EKTDRLKEKL FFASNPLRKQ EAMPNLDFET KEINQVAAHM ISGGSSNLVC  180
KGIGYEMWTG QLETDSHASL SLEYCSSMNE SLSIMKPNSV QFDSLDSLPS WDDGVPKFNQ  240
LEEDDIYSLG NSSGYFVDTF SH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.14e-83MYB family protein