PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935107.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 296aa MW: 34686.3 Da PI: 8.4988

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935107.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73	5.1e-23	51	133	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ +++r e+++++ ++k++k lW s+km+e+gf+rs++qCk+kw+nl + yk ++++e ++ ++++p++++l+ XP_022935107.1 51 QWSLQETKEFLTIRAELDQTFMETKRNKLLWGITSSKMKEKGFNRSAEQCKCKWKNLVTHYKGCETMEPEN--L-RQQFPFYTELK 133 7******************************************************************95..3.4589*9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEGHHPHHLI PLHHQQQFQL RPPSHLHPSL TVSADPTLAA AAAAATDRFP QWSLQETKEF 60 LTIRAELDQT FMETKRNKLL WGITSSKMKE KGFNRSAEQC KCKWKNLVTH YKGCETMEPE 120 NLRQQFPFYT ELKAIFGARM QRMFMAEAES GGSGSKKKMK TLSSDDEEEN EDSNGDGGET 180 KVSSRKRKKV KGTTMATDGG GGSGSRLKEI LEDFMNQQMQ MEVQWREAFE AREKEREMRE 240 MEWRRNMEAL EHERIMLERS WREREEQRRM REEIRGEKRD ALITALLNKI RRDDHM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	189	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	2e-54	Trihelix family protein