PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935162.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 251aa MW: 28497.1 Da PI: 6.7827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935162.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.2	1.9e-54	3	128	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv + +++ +i evd++k+ePwdLp ++k +ekewyfF+ d+ky++g r+nrat++gyWkatgkd+e+++ XP_022935162.1 3 LPPGFRFHPTDEELITHYLSPKVLSASFSS-PAIGEVDLNKCEPWDLPGRAKMGEKEWYFFCVIDRKYPRGLRTNRATQAGYWKATGKDREIFK- 95 79***********************999.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfykgrap+g++++Wvmheyrl XP_022935162.1 96 GRTLVGMKKTLVFYKGRAPRGHNSNWVMHEYRL 128 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MELPPGFRFH PTDEELITHY LSPKVLSASF SSPAIGEVDL NKCEPWDLPG RAKMGEKEWY 60 FFCVIDRKYP RGLRTNRATQ AGYWKATGKD REIFKGRTLV GMKKTLVFYK GRAPRGHNSN 120 WVMHEYRLHS KSSVYSLLPA NSSQKEWVIC RVFNKSGSSV GKAEMAVSCS SSVLPPLTES 180 DASQVTCFSN SMEEDQNEEG EFWVGLLEEP QNEGRFWRLE VTSSAKDFAF GTNHVSYPSP 240 PDDALDSLWN Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	7e-90	NAC family protein