PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935166.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 432aa MW: 46969.2 Da PI: 7.7983

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935166.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.7	6.5e-26	164	208	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_022935166.1 164 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 208 79****************************************996 PP
2	QLQ	42.3	2.2e-15	93	128	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +F+ aQ ++L+ Q+l+++y++a++ vPpeLl +i+k XP_022935166.1 93 YFSVAQRHELELQALIFRYMLAGAAVPPELLHPIKK 128 79********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MDFDLKKCRR QAESEEEEEV EEPQHSAKIC KFFVEQPHRL QQQQQQQPSS CSSVLPLFVP 60 GSINDSKASN MLSAFPDSTS SSSSHRLPRM LGYFSVAQRH ELELQALIFR YMLAGAAVPP 120 ELLHPIKKSL LSSTAPFFLH HPLQHFPHYP TLLQAGYWGR AAMDPEPGRC RRTDGKKWRC 180 SRDVVAGQKY CERHMHRGRN RSRKPVETTT TKPTSTTTTA AAVSSGGCSL CSNANRVVGG 240 GGGRPFLTVE SGNYSCVCGQ TPSVDLLHLN QGASSDSLSE NKNFYESHKE ASAGDGKSDG 300 HILRHFFDDW PRSENGGCGS DNSNASQRMN PTSLSISVAG NPPSSSSDVS LKLSTGGGSD 360 QGSGDPHLHQ NGHIDGEHMH LNWAAGWAAT QMASMGGPLA EALRSANKNS LPTTVLHQLQ 420 RTTNSEATFI ST

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MDFDLKKCRR QAESEEEEEV EEPQHSAKIC KFFVEQPHRL QQQQQQQPSS CSSVLPLFVP  60
GSINDSKASN MLSAFPDSTS SSSSHRLPRM LGYFSVAQRH ELELQALIFR YMLAGAAVPP  120
ELLHPIKKSL LSSTAPFFLH HPLQHFPHYP TLLQAGYWGR AAMDPEPGRC RRTDGKKWRC  180
SRDVVAGQKY CERHMHRGRN RSRKPVETTT TKPTSTTTTA AAVSSGGCSL CSNANRVVGG  240
GGGRPFLTVE SGNYSCVCGQ TPSVDLLHLN QGASSDSLSE NKNFYESHKE ASAGDGKSDG  300
HILRHFFDDW PRSENGGCGS DNSNASQRMN PTSLSISVAG NPPSSSSDVS LKLSTGGGSD  360
QGSGDPHLHQ NGHIDGEHMH LNWAAGWAAT QMASMGGPLA EALRSANKNS LPTTVLHQLQ  420
RTTNSEATFI ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-59	GRF family protein