PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935171.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 617aa MW: 69628 Da PI: 4.955

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935171.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00015	441	478	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s Lek+++++ +Lq XP_022935171.1 441 RQLIQDRIKELRQMVPNgA------KCSIDGLLEKTIKHMLYLQ 478 67799**********66......999999*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MDFSLQLWIH YHQSLTVGSV ANSGNHSWVF LENIFTSYLT SASIYEGPTE WLIQYASGIK 60 TILLVPVLPF GVLQLGSLQM VTENLSVVAS IKDRFSAINF IDGNATSIAP HKGAWSLCAS 120 VVPSPFESLD EQANFTTYMM EAQNHGAIEN IKPPVPTLNP SVTIQDELTV TRRIRLETLH 180 GEGDMLRINM EASFAPLYQS IKASELEFSD LFSLESLLPP CSRLRNDETG LIESTPRIVN 240 SYPVDNVVEQ QSGQNLVTKK EYGTADSLFS FPDDCELQKA FGPAFFAQKH TTDFSYDLSS 300 TINDTTSSLL CSRDFKEGDI ELLLEAMMPA FPNSVDTFSN NTINGRIAPV VRNSSLSAKT 360 CESESSAMVR DDPALWIFPE STATEIGRKT LTSLSTSNST VINELEENDR DVTRRRKGMK 420 RFNCSPEIKV TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK CSIDGLLEKT IKHMLYLQRV 480 TDQAEKLKQL AQQEEGFDSE YCTDLENECF QSNGTSWTRA FDIGSELQVC PIVVEDLEYH 540 GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN SWAHFVVEAP RGFHRMDVFW 600 PLMHLLQRQR NPMSCRI

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MDFSLQLWIH YHQSLTVGSV ANSGNHSWVF LENIFTSYLT SASIYEGPTE WLIQYASGIK  60
TILLVPVLPF GVLQLGSLQM VTENLSVVAS IKDRFSAINF IDGNATSIAP HKGAWSLCAS  120
VVPSPFESLD EQANFTTYMM EAQNHGAIEN IKPPVPTLNP SVTIQDELTV TRRIRLETLH  180
GEGDMLRINM EASFAPLYQS IKASELEFSD LFSLESLLPP CSRLRNDETG LIESTPRIVN  240
SYPVDNVVEQ QSGQNLVTKK EYGTADSLFS FPDDCELQKA FGPAFFAQKH TTDFSYDLSS  300
TINDTTSSLL CSRDFKEGDI ELLLEAMMPA FPNSVDTFSN NTINGRIAPV VRNSSLSAKT  360
CESESSAMVR DDPALWIFPE STATEIGRKT LTSLSTSNST VINELEENDR DVTRRRKGMK  420
RFNCSPEIKV TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK CSIDGLLEKT IKHMLYLQRV  480
TDQAEKLKQL AQQEEGFDSE YCTDLENECF QSNGTSWTRA FDIGSELQVC PIVVEDLEYH  540
GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN SWAHFVVEAP RGFHRMDVFW  600
PLMHLLQRQR NPMSCRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	5e-45	bHLH family protein