PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935181.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 305aa    MW: 34305.3 Da    PI: 6.0476
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935181.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  lv +++++G+ +W+++++  g+ R+ k+c++rw +yl
   XP_022935181.1 14 KGPWTPEEDIVLVSYIQRHGPANWRAVPANTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.25.8e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022935181.1  67 RGNFTHHEEKMIVHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGRPPCCDKQ GVKKGPWTPE EDIVLVSYIQ RHGPANWRAV PANTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF THHEEKMIVH LQALLGNRWA AIASYLPQRT DNDIKNHWNT HLKKSLNNTN  120
HYPSPTTHLS GDALFTSRGQ WERRLQTDIQ MAKQALSDAL SPETSKPPPP PLPMAESQTP  180
NRQIPTYASS ADNIARWLEE WNKNPPTNSS CRSSSPPVVD SGGEKVSGAG SSESMDTFLG  240
FDYFESSNSE VSPETSVFQG ESEMDESEGL LAMELLEEWL HGDAKDYYFT DITVDEKLIK  300
YDNVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.17e-98MYB family protein