PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935191.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 253aa MW: 28583.1 Da PI: 5.9607

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935191.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.5	8.6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W++ ++ g+ R++k+c++rw +yl XP_022935191.1 14 KGPWTAEEDKKLINFILSNGQCCWRALPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51.2	2.8e-16	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E++ +d+++qlG++ W++Ia++++ gRt++++k++w+++ XP_022935191.1 72 DLEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 5699***********.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGRQPCCEKV GLKKGPWTAE EDKKLINFIL SNGQCCWRAL PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDLEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPQTHKPIS FPTDQLQSQI PCHLDTETLN NSSVVAKVDE GQGLTSTTIV EPQVLSNPCV 180 STSSSSSSSN SNPIEFEDLE FLDFEWAYSN NTSNNDNSIG FWEDDFNSWD FLVGREDGEV 240 PIFQESWPCG SGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	5e-90	MYB family protein