PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935192.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 239aa    MW: 27218.6 Da    PI: 7.5614
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935192.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.61.2e-1967119456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + ++++eqle Le+ F+++ +++ +++++L+k+lgL+ rq+ vWFqNrRa++k
  XP_022935192.1  67 KKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWK 119
                     55699***********************************************9 PP
2HD-ZIP_I/II118.73.1e-3866157293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kk+rls+eq+++LE+sF+ee kL+p+rK++l++eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk+++da+++e+++L++ev +L++ l+e
  XP_022935192.1  66 KKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLKSMLRE 157
                     9**************************************************************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEWATGSFRP FLSRPPESSF GFLYNYNLEQ YQGIDVKHSA MAGTSETVLQ GLVPGMDMNS  60
YGNLDKKKRL SSEQLESLER SFQEEIKLDP NRKQKLSKEL GLQPRQIAVW FQNRRARWKA  120
KQLEHLYDTL KQEFDAISRE KHKLQEEVIK LKSMLRELQA ARNQVSTVYT DLSGEETVES  180
TSVGAGCSSK PRAVATAAAA AANQYPTPPE QCNYVFNTEE YNPMSPTFWG SLPPTYHPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16695KKKRLSSEQLESLERSFQEEIKLDPNRKQK
2114122RRARWKAKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.17e-40HD-ZIP family protein