PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935238.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 229aa    MW: 25854.5 Da    PI: 9.4971
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935238.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.41.9e-29181371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF Ptdeelv +yLk+kv g +l++ +vi+e++++ ++Pw Lp  +   +++ +fFsk+++      r    +  g+Wk+ gk+k ++++
  XP_022935238.1  18 LPVGYRFCPTDEELVEHYLKRKVFGLPLPA-SVIPEFNVFLTDPWGLPGDL---KEKRFFFSKQKSFL----RM--NAGCGIWKSIGKEKFIITQ 102
                     799***************************.99***************544...45679998876654....33..4578***********9998 PP

             NAM  96 .kgelvglkktLvfykgrapk.gektdWvmheyrl 128
                       ++l gl+k+Lvf + + p+ ++ t+Wvmheyrl
  XP_022935238.1 103 aINQLFGLRKSLVFSESKFPErTRTTRWVMHEYRL 137
                     66778**********887665156789******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MFPMENTSNF VFDGGIRLPV GYRFCPTDEE LVEHYLKRKV FGLPLPASVI PEFNVFLTDP  60
WGLPGDLKEK RFFFSKQKSF LRMNAGCGIW KSIGKEKFII TQAINQLFGL RKSLVFSESK  120
FPERTRTTRW VMHEYRLARS AATSNSTQIE VGDWAVYCLF QKRRKHKRKG VKENQRVAAA  180
QGSILDLTVE DGWEFPQPCA SCSSGVTQVS SNGTGSTDQE ETSGGLGFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163169RRKHKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-41NAC family protein