PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935385.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 218aa MW: 25129 Da PI: 7.0093

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935385.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	7	54	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++v+++ +g+W+++a+ g++Rt+k+c++rw++yl XP_022935385.1 7 KGPWTADEDSLLSHYVTLHSKGHWNSVAHFTGLKRTGKSCRLRWLNYL 54 79********************************************97 PP
2	Myb_DNA-binding	48.4	2.1e-15	60	104	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G+++W++Ia+ ++ gRt++++k++w++ XP_022935385.1 60 RGNITLQEQLLILQLHSRWGNRSWSKIAQFLP-GRTDNEIKNYWRT 104 7899**************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MADHVKKGPW TADEDSLLSH YVTLHSKGHW NSVAHFTGLK RTGKSCRLRW LNYLRPNVRR 60 GNITLQEQLL ILQLHSRWGN RSWSKIAQFL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ 120 RFRDTMRLVW IPHLVERIAA TSGQSLPACT ETSTSTPTIS ESTLDDNSVN VDVSASCSDT 180 SDWGDGFEAG WWEGDEVESS FESLWIEENI HFLQQLFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-67	MYB family protein