PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935399.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 771aa MW: 85450.7 Da PI: 7.0739

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935399.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022935399.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MQTDSIVSSN SETHHHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRPLQG ENCLPPIANG 180 VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ 240 RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTDK NVLRDQNTLG KKNTDPAGSP 300 LLLLPSLQPN SLIDVASTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH 360 LSRKWGNSSA AHGELMLFPY SIQRKSLADC QRWSQDSFES AGDVYATIGR PQVFRLRYGW 420 CSNAEHGSIE LQTSVPAYCI QDDHVMDSRD IEGRIVDVAS IDAQPVNFNK NEVGTLSKNM 480 STPTAPSETE RSISARPNDD LPRSSNPALN MSWDKKNVTD TTIIHRSEDV DDLKSSNGTS 540 LSAGEWADSL TNISIGDLLS GVSQDVDANC DVAPLAEGTQ CLQQIPFSCD SFDAAIAAHV 600 SRQQNKAVSH PTLLSHASSI FDAEETCDAF SFQKNPVILH DVSSSFTFSS VRACEHIART 660 NSMGSSHMTE DLPRSESPSE DHIQGDPKDE CQANPQISET NNIDELADIY WPDSLGPLDL 720 DFPQTNKYHN EELILGDSLS SLNRLIASSL DAFQSCSFFG FDKKEPSAFN S

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MQTDSIVSSN SETHHHSETF VAHVGDQGIA ASTPDHVIEP PPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHRLLKDRK KNVRKRPLQG ENCLPPIANG  180
VSNQSRALGH DGLAVKLVLV DTQNIPKLGP RKTVSKRNLN VGINRGNNGG YPTVLKPSRQ  240
RRKSGGVSSA AYKKWEKAAI AGVSLVADAA EHLERTVTDK NVLRDQNTLG KKNTDPAGSP  300
LLLLPSLQPN SLIDVASTKL KLQLFPVDDG TRRALELDKH NPHLELTLST RKKISSVLEH  360
LSRKWGNSSA AHGELMLFPY SIQRKSLADC QRWSQDSFES AGDVYATIGR PQVFRLRYGW  420
CSNAEHGSIE LQTSVPAYCI QDDHVMDSRD IEGRIVDVAS IDAQPVNFNK NEVGTLSKNM  480
STPTAPSETE RSISARPNDD LPRSSNPALN MSWDKKNVTD TTIIHRSEDV DDLKSSNGTS  540
LSAGEWADSL TNISIGDLLS GVSQDVDANC DVAPLAEGTQ CLQQIPFSCD SFDAAIAAHV  600
SRQQNKAVSH PTLLSHASSI FDAEETCDAF SFQKNPVILH DVSSSFTFSS VRACEHIART  660
NSMGSSHMTE DLPRSESPSE DHIQGDPKDE CQANPQISET NNIDELADIY WPDSLGPLDL  720
DFPQTNKYHN EELILGDSLS SLNRLIASSL DAFQSCSFFG FDKKEPSAFN S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein