PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935602.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 462aa MW: 51138.4 Da PI: 9.2644

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935602.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.8	3.5e-31	197	253	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgs++prsYY+Ct++ Cpvkkkvers d+k+ ei+Y+geH+h+k XP_022935602.1 197 DGYNWRKYGQKQVKGSKYPRSYYKCTHPCCPVKKKVERSL-DGKIAEIVYKGEHDHPK 253 9*************************************.*************85 PP
2	WRKY	89.9	2.1e-28	393	448	4	59
SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 4 gynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 g +WrKYGqK+vkg+ +prsYYrCt +C+++k ver++edp+ +++tYeg+Hnh+ XP_022935602.1 393 GIRWRKYGQKVVKGNLYPRSYYRCTGLKCKARKYVERASEDPDSFITTYEGKHNHD 448 679****************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MDNKAAERVV VARPVASRPT CSSFKSFSDI LACAFNTSPP NMSSETTKVA AIRPKTVRFK 60 LKDNPAPSSM AKIPETAPRT ISRSSSDNLA ISDSQTTVLF KPLAKHVSKR TVSQLSHVGN 120 TNLQNCLPHP FDKDSIQCPN QGKDNVQSAL TSNLPQNITS TVENSQSIES SRVTLNYSKE 180 DPTLLHSQVS CAQPSYDGYN WRKYGQKQVK GSKYPRSYYK CTHPCCPVKK KVERSLDGKI 240 AEIVYKGEHD HPKPQPLKLN SSGTQGEGSI SNGTVRDTNP ELWLYYLNGQ IEGSESRLEN 300 HIEKICQGRV TLPFDPVVVR EVHGGCRISD NSCGLSVECE EGSKGLESTG DKLRSKRRGG 360 KNPTNEADLS IEGVYEHHAM ARGSADIEIS GKGIRWRKYG QKVVKGNLYP RSYYRCTGLK 420 CKARKYVERA SEDPDSFITT YEGKHNHDIS LGNANHVTPQ ME

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MDNKAAERVV VARPVASRPT CSSFKSFSDI LACAFNTSPP NMSSETTKVA AIRPKTVRFK  60
LKDNPAPSSM AKIPETAPRT ISRSSSDNLA ISDSQTTVLF KPLAKHVSKR TVSQLSHVGN  120
TNLQNCLPHP FDKDSIQCPN QGKDNVQSAL TSNLPQNITS TVENSQSIES SRVTLNYSKE  180
DPTLLHSQVS CAQPSYDGYN WRKYGQKQVK GSKYPRSYYK CTHPCCPVKK KVERSLDGKI  240
AEIVYKGEHD HPKPQPLKLN SSGTQGEGSI SNGTVRDTNP ELWLYYLNGQ IEGSESRLEN  300
HIEKICQGRV TLPFDPVVVR EVHGGCRISD NSCGLSVECE EGSKGLESTG DKLRSKRRGG  360
KNPTNEADLS IEGVYEHHAM ARGSADIEIS GKGIRWRKYG QKVVKGNLYP RSYYRCTGLK  420
CKARKYVERA SEDPDSFITT YEGKHNHDIS LGNANHVTPQ ME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	2e-84	WRKY family protein