PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935700.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 358aa    MW: 38800.8 Da    PI: 9.2849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935700.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.5e-13285330655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  XP_022935700.1 285 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 330
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGSNTHHSFQ QPNSALLRFR SAPSSLLADY AQGIDSKRSN PFESSESERM VSRFGSRNDS  60
ESPAAGNYCS GLPPHYPRPS TAVNCSSSSS SSSSSSSSSS SSSSSSSMSS SVGFLGSNLV  120
RQSSSPAGVF SQLNQNGYGG GSFNRLSGSN NNGGGELSFS SLLPSSLGML SHISEQVIGN  180
EKLTNTNGEP QFFTPTGFPF ASWNESSQFS DTFPVVKHDP DSNRKLFSSS HQNGEIGNRV  240
HLLSHHLSLP KNTSDIASIE KLLQLQDAVP CRIRAKRGCA THPRSIAERV RRTRISERMR  300
KLQDLVPNMD KQTNTADMLD LAVDYIKELQ RQFKTLSDNR ANCVCVNTQK AVSNQMIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-86bHLH family protein