PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935716.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 363aa MW: 40033.9 Da PI: 7.8922

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935716.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.9	1.4e-55	23	151	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s XP_022935716.1 23 LPPGFRFHPTDEELITYYLLKKVLDSSFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSV 116 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_022935716.1 117 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 151 45677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDVSSFSRHD SAAAAADHHP HHLPPGFRFH PTDEELITYY LLKKVLDSSF SGRAIAEVDL 60 NKCEPWELPE KAKMGEKEWY FFSLRDRKYP TGLRTNRATE AGYWKATGKD REIYSVKTCS 120 LVGMKKTLVF YRGRAPKGEK SNWVMHEYRL EGKFAYHYLS TNSKDEWVIS RVFQKSGTGV 180 GGGVDGGGGS RKPRFIPGTV SVYPEPGSPS SVSLPPLLDS SLYSAPVAAT AVSGNITDRD 240 SCSYNSPREH VSCFSTTTGG SFNIPSYDFA TPPPLLAAVD PSPRFHRNMG LSAFPSLRSL 300 QENLQLPFFY SPVNLPSPPP PPLHHGNMSS SADVAACNSA GNWAVSDEPR SMNSTELDCM 360 WSY

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDVSSFSRHD SAAAAADHHP HHLPPGFRFH PTDEELITYY LLKKVLDSSF SGRAIAEVDL  60
NKCEPWELPE KAKMGEKEWY FFSLRDRKYP TGLRTNRATE AGYWKATGKD REIYSVKTCS  120
LVGMKKTLVF YRGRAPKGEK SNWVMHEYRL EGKFAYHYLS TNSKDEWVIS RVFQKSGTGV  180
GGGVDGGGGS RKPRFIPGTV SVYPEPGSPS SVSLPPLLDS SLYSAPVAAT AVSGNITDRD  240
SCSYNSPREH VSCFSTTTGG SFNIPSYDFA TPPPLLAAVD PSPRFHRNMG LSAFPSLRSL  300
QENLQLPFFY SPVNLPSPPP PPLHHGNMSS SADVAACNSA GNWAVSDEPR SMNSTELDCM  360
WSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-107	NAC family protein