PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935801.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 290aa    MW: 32759.9 Da    PI: 7.9858
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935801.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl
   XP_022935801.1 14 KGPWSPDEDAKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding38.13.7e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T++Ed ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_022935801.1  69 GDFTEDEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPD EDAKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGD FTEDEDRIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKRLYGK  120
HHEKQQQPVR RGRKIKSEIG NSMDIVFDNH VIYDNNNNNN QSPFLPELTP ALNSPPPPPP  180
YANYQPLQFP STPRQLSGVD LSKTDDVQFG MDGGSCLPVT SCQVGELEKV VYSNTASFED  240
GLQFSYDNNG LMNDLDWGEM SCLISAPLYS SMAHDSMIGS SYLEQQKQKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.13e-79MYB family protein