PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022935802.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 283aa MW: 30564.7 Da PI: 7.4211

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022935802.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.7	1.1e-19	127	181	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F++++ +s +++++LA++l+L rqV vWFqNrRa+ k XP_022935802.1 127 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTK 181 78889************************************************98 PP
2	HD-ZIP_I/II	120.8	7e-39	127	215	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE++F+e++ L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++lkeen++L+ke +eL+ + XP_022935802.1 127 RKKLRLTKEQSAVLEDNFKEHSSLSPKQKQDLARQLNLRPRQVEVWFQNRRARTKLKQTEMDCELLKKCCEKLKEENTKLQKELQELK-S 215 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MDADCNTGLL LGLGRGLDHH NSMRPHVPDV AGVKKKLQVL KFDDILPSLT LGLSVVVDKS 60 GGESAATAAD ELIQQGSSGS PVSSFSHSSG FKRERDGGAG EEPAEAEVFM ERISMKVAEE 120 EEDGSPRKKL RLTKEQSAVL EDNFKEHSSL SPKQKQDLAR QLNLRPRQVE VWFQNRRART 180 KLKQTEMDCE LLKKCCEKLK EENTKLQKEL QELKSLKLTA PPFCMQLQAA TLTVCPSCES 240 SICGGGGGGG GGGGADASPA NTFSIGSKPH FLKFPFNHPS AAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	184	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22800.1	3e-46	HD-ZIP family protein