PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935808.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 423aa    MW: 46169.6 Da    PI: 8.0592
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935808.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.9e-053083461255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022935808.1 308 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 346
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MDSAANLHQL QEQLLVPSSC SSSSSLPVVS SCLGLGSSHG WTPNVSPNNN SCNYNPRIFN  60
GFTSFPSRSD CGQKNTNSSS TLQDLGFQWS GAVNTGTFFT QSLHDPQAGK IKDEISSFPK  120
FTQILNNPSS TNQDFHHFPS TNQVKNNSNN DSDLNDLTNK LLIKTLISSG CQINGADPTK  180
LNRPHFPQIY PSINVSNWNL SSPAPAFSDS LDLNLQTPAD MLLSAANFSH SPDSFGSFKQ  240
TLSDFQDQMH PPPASLPCIP NKRKPFCTEA TEPKRPCNSM EPSLNQQSPP LKKSRLDSRA  300
SCPPFKVRKE KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLQNQVE TLSVPYMKPS  360
SNKITRPTHR SSVEDGNEER PNRDLRSRGL CLVPLGCLSY VTGDGGGIWP PTGFNGGTLD  420
KYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.17e-53bHLH family protein