PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022935885.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 265aa    MW: 30120.8 Da    PI: 10.1514
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022935885.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-17138187255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  XP_022935885.1 138 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPLAAARAYDTAVFYLRG 187
                     59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSAEVGFVLK EDQRGGRAQS THKQPSRKQF RPFLSSSLSL SLYIYTHPNP KPPNHVLTTA  60
PPSFLARSGC PSFCFRTPDS DHNRNRKSHT IIRTKLYKIS IFCLPEMDGE VFSAVDSSPT  120
ATEKRKQRHQ NQLQKERPYR GIRMRKWGKW VAEIREPNKR SRIWLGSYTT PLAAARAYDT  180
AVFYLRGPTA RLNFPELMFE EDQLHDMSAA SIRKRATEVG ARVDAIEISL HASNSNSNSN  240
SNSSTHTSEK PDLNEYPSPE SSDHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.16e-52ERF family protein