PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936150.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 334aa    MW: 37366 Da    PI: 6.1325
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936150.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.4e-17222256135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022936150.1 222 CLHCATDKTPQWRTGPFGPKTLCNACGVRYKSGRL 256
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEAPHYFHPA FSTQNPHSTD TLETTTTAAA AAADHFLVED LLDFSNDDHV VFTDATSDNQ  60
TPTSTDSSAL TLLEQPNNGH HNYSFLDANF STDLPVPYDD LAELEWLSNF VEDSFSTDDL  120
EKLSLISGVN SRTDDDDAAA KPREFQTGLS AGFHPDMSVP AKAARSKRSR ACIWNSRVSV  180
LSPTNSSSET DVVVTLTAKK PSKKKETPDD TLSPSNGEGR KCLHCATDKT PQWRTGPFGP  240
KTLCNACGVR YKSGRLVPEY RPAASPTFVL TKHSNSHRKV MELRRQKEMM RAQQQQHHHH  300
HQQQHHQETM EFNHASNNDN DDYLIHQHIA PIYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-69GATA family protein