PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936250.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 275aa    MW: 31381.1 Da    PI: 6.7566
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936250.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.61.4e-2097157257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+ + ql++Le+ Fe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  XP_022936250.1  97 RQRWTPLPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 157
                     89*****************99**************************************97 PP
2Wus_type_Homeobox97.31.2e-3196159265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +r+RWtP p Q++iLe+++++G  tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq
     XP_022936250.1  96 SRQRWTPLPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 159
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MMDPYHHHHH HHQNPPLRDD HLRYLTGTTA GALYVKVMTD EQLETLRKQI AVYATICEQL  60
VEMHKTLTAH QDLKGMRLGS VYYEPLMASS SHKITSRQRW TPLPVQLQIL ERIFEQGNGT  120
PSKQKIKEIT SELGQHGQIS ESNVYNWFQN RRARSKRKQQ GTAPTYGESE LETEVESPKD  180
KKTKPVDFQT PQTSAPLGED MGFQSPEMHY ELHFLDPNTN KADTLFPSNG SSKTARTFSQ  240
MSSYEAGNEQ LTGKIETPEN YSLYSQAEGC MAEQP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151159RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.15e-80WOX family protein