PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936544.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 195aa    MW: 21869.8 Da    PI: 9.6732
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936544.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.3e-191160255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a+  ++g
  XP_022936544.1 11 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFDTAEDAARAYDQAAILMNG 60
                    89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MVSRVMVYSR KFRGVRQRQW GSWVSEIRHP LLKRRVWLGT FDTAEDAARA YDQAAILMNG  60
QNAKTNFPAS KDQSAEASHG HGSSPMTPKA LSELLSTKLR KCCKNPSPSL TCLRLDSDNA  120
HIGVWQKRAG TRATSNWVMR IELGKKEIPS PLPSPESTSQ EPDGHRNGID EEDRIAMQMI  180
EELLNWNCPL PSISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.23e-72ERF family protein