PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936585.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 440aa MW: 50532.8 Da PI: 8.9632

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936585.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.2	2.5e-30	14	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p Gf F+Pt+eel+++yLk+k gk+ + ++ike+d+yk++P++Lp k + +++ ew+fF + +++r+t++g W++tg +++++ XP_022936585.1 14 PTGFGFRPTEEELITYYLKNKNVGKEYLV-RFIKEIDLYKFDPEQLPdKsYFPSSNFEWFFFRANTA------NNKRTTATGGWRSTGDPRRIKA 101 89**********************888.89***********53344445559999987655......46899999*********9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++e++ + ++ vf++g+ ++ kt+Wv+hey+l XP_022936585.1 102 ReTNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKL 136 9667779999*********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MAATAEFPFA SPFPTGFGFR PTEEELITYY LKNKNVGKEY LVRFIKEIDL YKFDPEQLPD 60 KSYFPSSNFE WFFFRANTAN NKRTTATGGW RSTGDPRRIK ARETNEVIAT CHIYVFHRGK 120 GGNAIKTNWV IHEYKLHTLT DITSQPFIIF RLKKNAEERR VSIRDQEDGQ NSTVASHRTK 180 KVKRGGEIRE MNRDEQSICK PLGSCTQQPV NAYDDNGEVN MQPIQLGDGD SAYGNMTEFI 240 NKTVIWDDIF NYEVTPNMCG SLRRSEPQPG LMYTQQSESQ LDSLRNFVHD DKNWDEMTSN 300 NQEWEGMYYQ FQGGFSSQTN SNTAFGLPYN HTMKRLERAP LPPRLLRLSD VKHMEIGNSP 360 QLSGTDSNNE LKSEAGNKAT KGATPQHCFS SKNRFSYILT TKRIHHNSTL PPLVYVAKAL 420 LGVVVLVMFA QDVLLYRYRR

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MAATAEFPFA SPFPTGFGFR PTEEELITYY LKNKNVGKEY LVRFIKEIDL YKFDPEQLPD  60
KSYFPSSNFE WFFFRANTAN NKRTTATGGW RSTGDPRRIK ARETNEVIAT CHIYVFHRGK  120
GGNAIKTNWV IHEYKLHTLT DITSQPFIIF RLKKNAEERR VSIRDQEDGQ NSTVASHRTK  180
KVKRGGEIRE MNRDEQSICK PLGSCTQQPV NAYDDNGEVN MQPIQLGDGD SAYGNMTEFI  240
NKTVIWDDIF NYEVTPNMCG SLRRSEPQPG LMYTQQSESQ LDSLRNFVHD DKNWDEMTSN  300
NQEWEGMYYQ FQGGFSSQTN SNTAFGLPYN HTMKRLERAP LPPRLLRLSD VKHMEIGNSP  360
QLSGTDSNNE LKSEAGNKAT KGATPQHCFS SKNRFSYILT TKRIHHNSTL PPLVYVAKAL  420
LGVVVLVMFA QDVLLYRYRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	4e-27	NAC family protein