PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936594.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 329aa    MW: 37629.1 Da    PI: 8.5906
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936594.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.6e-36251172103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF+++ F+kg+k+ll++
  XP_022936594.1  25 FLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDFFRKGDKHLLCE 110
                     9*****************************************************************99.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  XP_022936594.1 111 IHRRKTA 117
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MALMVDNCEG VLVSLESHKP IPAPFLTKTY QLVDDPSTDH IVSWGEDDTT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANDFF RKGDKHLLCE IHRRKTAQPQ  120
HQQSLSPLAL NNPGFYHFHA RPSISPSDSD DQNNWCDSPP LSSSGTNNNN NSVSALSEDN  180
ERLRRSNNML MSELAHMKKL YNDIIYFVQN HVKPVAPSNS YQYSTFPVVQ RQPNHHLVGY  240
NNPTNAKQVS GQTHLVTATP NNNNNNNKSF VRIVEEQQKT KLFGVAIHSK KRLHPEYASN  300
NIGKENNNKA RFVLEKDDLG LNLMPPSAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-107HSF family protein