PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936595.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 240aa    MW: 26810.5 Da    PI: 6.8036
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936595.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08139179954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_022936595.1 139 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 179
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MENDDLKSED QMEIMMMMQQ MEKIPEFYNH LSPPSDHFSS STTDPHCLET LQQAAESSSP  60
PFTNNLPYNL PQTVPFPTSS RWRNSGGETD LQKQRSVAAM REMIFRIAVM QPIQIDPEAV  120
KPPKRRNVKI STDPQSVAAR HRRERISERI RILQRLVPGG TKMDTASMLD EAIHYVKFLK  180
TQVQSLERAA TNRPLPDAAA AAAAAAAPGV GFPLEMSSGS YVPMAKPSQM THNLEQYGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.15e-44bHLH family protein