PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936598.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 343aa MW: 38722 Da PI: 10.559

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936598.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.1	1.9e-32	24	145	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+Gf F+Pt+e+l+++yLkkk +g++ ++ike+d+yk+eP++Lp k++ +++ ew+fF + +r+t +g Wk++g ++++ XP_022936598.1 24 LPAGFVFRPTEEQLITHYLKKKNDGNESV--SFIKEIDLYKFEPEQLPdKSFIPSDNfEWFFFRASTLV------IERTTGTGSWKSSGDPRPIK 110 799********************9944..58***********6544344555999887664......6899**************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ +++++g ++++vf++gr kg+kt+Wv+hey+ XP_022936598.1 111 ARgTDQVIGSREIFVFHRGRGDKGVKTNWVIHEYK 145 977788**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAATAKFSTK LMAATAKFSY LSSLPAGFVF RPTEEQLITH YLKKKNDGNE SVSFIKEIDL 60 YKFEPEQLPD KSFIPSDNFE WFFFRASTLV IERTTGTGSW KSSGDPRPIK ARGTDQVIGS 120 REIFVFHRGR GDKGVKTNWV IHEYKPRPVS KIPSKPQFVI FRLKNENADG QSSSVASQTK 180 KKNITQKPGA GTSKNPDNAI QSVYDFEKHI TESVFGKHKN LDQMTSNKHE ESEELDDAYA 240 DNEERKLRRE PTSVKVFRVN GNTNSRKVVS KGSKPQKGPL SKETPTTKTS RYKVQGDNTR 300 TLLVNPPHPS TKRIHHNSTV HPVAKLLLGI GMFKRMYLPS GLF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAATAKFSTK LMAATAKFSY LSSLPAGFVF RPTEEQLITH YLKKKNDGNE SVSFIKEIDL  60
YKFEPEQLPD KSFIPSDNFE WFFFRASTLV IERTTGTGSW KSSGDPRPIK ARGTDQVIGS  120
REIFVFHRGR GDKGVKTNWV IHEYKPRPVS KIPSKPQFVI FRLKNENADG QSSSVASQTK  180
KKNITQKPGA GTSKNPDNAI QSVYDFEKHI TESVFGKHKN LDQMTSNKHE ESEELDDAYA  240
DNEERKLRRE PTSVKVFRVN GNTNSRKVVS KGSKPQKGPL SKETPTTKTS RYKVQGDNTR  300
TLLVNPPHPS TKRIHHNSTV HPVAKLLLGI GMFKRMYLPS GLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	6e-33	NAC family protein