PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936607.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 293aa    MW: 33061.7 Da    PI: 10.4945
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936607.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.51.3e-32241451127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+Gf F+Pt+e+l+++yLkkk +g++    ++ike+d+yk+eP++Lp k++  +++ ew+fF  +          +r+t +g Wk++g  ++++
  XP_022936607.1  24 LPAGFVFRPTEEQLITHYLKKKNDGNESV--SFIKEIDLYKFEPEQLPdKSFIPSDNfEWFFFRASTLV------IERTTGTGSWKSSGDPRPIK 110
                     799**********************9944..58***************6544344555**999887664......6899**************** PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                     ++ +++++g ++++vf++gr  kg+kt+Wv+hey+
  XP_022936607.1 111 ARgTDQVIGSREIFVFHRGRGDKGVKTNWVIHEYK 145
                     *977788***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MAATAKFSTK LMAATAKFSY LSSLPAGFVF RPTEEQLITH YLKKKNDGNE SVSFIKEIDL  60
YKFEPEQLPD KSFIPSDNFE WFFFRASTLV IERTTGTGSW KSSGDPRPIK ARGTDQVIGS  120
REIFVFHRGR GDKGVKTNWV IHEYKPRPVS KIPSKPQFVI FRLKNENADG QSSSVASQTK  180
KKNITQKPGA GTSKNPDNAI QSVYDFEKHI TESVFGKHKN LDQMTSNKHE ESDTLRLSFS  240
ILQVQGDNTR TLLVNPPHPS TKRIHHNSTV HPVAKLLLGI GMFKRMYLPS GLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.11e-32NAC family protein