PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022936620.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 330aa    MW: 37557.6 Da    PI: 10.009
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022936620.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.46.2e-32131361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+Gf F+Pt e+l+++yLkkk +g+++ + ++ike+d+yk+eP++Lp k++  +++ ew+fF  +          +r+t +g Wk++g  ++++
  XP_022936620.1  13 LPAGFVFRPTVEQLITHYLKKKNDGNECVV-SFIKEIDLYKFEPEQLPdKSFIPSDNfEWFFFRANTL------VIERTTGTGSWKSSGDPRPIK 100
                     799************************999.89***************6544344555**99988765......4689***************** PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ ++e++g ++++vf++gr  kg+kt+Wv+ eyrl
  XP_022936620.1 101 ARgTDEVIGSREIFVFHRGRGDKGVKTNWVIREYRL 136
                     *977788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAATAKFSYL SSLPAGFVFR PTVEQLITHY LKKKNDGNEC VVSFIKEIDL YKFEPEQLPD  60
KSFIPSDNFE WFFFRANTLV IERTTGTGSW KSSGDPRPIK ARGTDEVIGS REIFVFHRGR  120
GDKGVKTNWV IREYRLHPDT KIPSQHPFLI FKLKDKNADG EKKITPKPGA GTSKNPDNAI  180
QSVYDFEKHI TESVFGKHKN LDQMTSNKHE ESEESDDAYA DNQIRKLRRD PISVKLLTVS  240
GNTKPRKVVS EGSKQQKGPL SEETPTTETS QYKTQGDNAH TQIVNPPHSS TKRIHHNSSQ  300
HPLVCFAKAL LGIVMLVMFA RDMVLYRHRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.17e-33NAC family protein