PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936768.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1153aa MW: 128044 Da PI: 8.8275

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936768.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.7e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ +E e++++a +++G++ Wk++a+ + +R+ +++ XP_022936768.1 46 QWSRDEVEQFYEAYRKYGKD-WKKVAAAVR-NRSTEMV 81 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1153 aa Download sequence
MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR 60 KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRCQR 120 DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHFGD ASQSQSLPTN YGCLSLLKKR 180 RSGIKPHAVG KRTPRVPVSY SYDKDSRERI FSPSRHTSKL KVDDPNDDDV AHEIALVLTE 240 ASQRDGSPQL SQTPNPKIEG HVLSPIRNDR MRSESDMMST KFRCSEMDEG GCELSLGSTG 300 ADNADYDQGK NTREIQRKGK RYYGKKAEVE ESMYNHLDDI KEACSGTEEG QKSGSLRGKL 360 ETEDFDVKSV RTSFKGPRKR SKKALFGDEC SAFDALQTLA DLSLMMPDTT ADTEPSAKVK 420 EENLDVMDKS KMKGNHSVVG AGTSASKTSK TGKASGNNVG PIPEAEGIQG SNNGNRKRKQ 480 KSSPFKISSK DEDSNDSRVN DTPKTKATDD GKSSFGKVKR SPHNAGLAKS SKISKPLDHH 540 SSSSTDHKRE DGDYALSTTQ VPSINPISLP TKMRSRRKMD LLKSQRDSKI ADNILIDQLN 600 EQHSNCLSWH KLRRWCVFEW LYSAIDFPWF AKCEFVEYLN HVGLGHIPRL TRVEWGVIRS 660 SLGRPRRFSA QFLKEEKQKL NQYRESVRKH YAELRAGTRE GLPTDLARPL SVGQRVIAIH 720 PKTREIHDGS VLTVDYSRCR VQFDRPELGV EFVMDIECMP LNPVENMPAN LSRHGVTLDK 780 IFGNLNEVKI NGLLKEAKIE DYIKSTSNDK LESTDGSVFI SPSTHHINKL IKQAKVDLGC 840 SNLQTKFGLN ETVGIQQEAS SQLSVLAQIQ AKEADVHALS ELSRALDKKE VVVSELKRLN 900 DEVLENQING DNLLKDSENF KKQYAAVLLQ LNEVNEQVSS ALYSLRQRNT YQGTSPLMFL 960 KPVHDLGDPC SHAQEPGSHV AEIVGSSRAK AQTMIDEAMQ AILALKKRES NLENIEEAID 1020 FVSNKLSVDD LALPTVKSTS ADTSNATPVP QNHFNVGASN PSAANDIVGS KSNSPSDKPE 1080 VEIPSELIAH CVATLLMIQK CTERQFPPAD VAQVLDSAVN SLQPCCPQNL PLYAEIQKCM 1140 GIIRSQILAL IPT

Sequence ? help Back to Top

Protein Sequence Length: 1153 aa Download sequence

MAPSRKSRSV NKRLSSANEA SSSKYVEAPS KGKQKKRKFA DLLGPQWSRD EVEQFYEAYR  60
KYGKDWKKVA AAVRNRSTEM VEALFTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLMRCQR  120
DSESEQESNE DSGATRKPQK RLRGKSRNNN SKGLDAHFGD ASQSQSLPTN YGCLSLLKKR  180
RSGIKPHAVG KRTPRVPVSY SYDKDSRERI FSPSRHTSKL KVDDPNDDDV AHEIALVLTE  240
ASQRDGSPQL SQTPNPKIEG HVLSPIRNDR MRSESDMMST KFRCSEMDEG GCELSLGSTG  300
ADNADYDQGK NTREIQRKGK RYYGKKAEVE ESMYNHLDDI KEACSGTEEG QKSGSLRGKL  360
ETEDFDVKSV RTSFKGPRKR SKKALFGDEC SAFDALQTLA DLSLMMPDTT ADTEPSAKVK  420
EENLDVMDKS KMKGNHSVVG AGTSASKTSK TGKASGNNVG PIPEAEGIQG SNNGNRKRKQ  480
KSSPFKISSK DEDSNDSRVN DTPKTKATDD GKSSFGKVKR SPHNAGLAKS SKISKPLDHH  540
SSSSTDHKRE DGDYALSTTQ VPSINPISLP TKMRSRRKMD LLKSQRDSKI ADNILIDQLN  600
EQHSNCLSWH KLRRWCVFEW LYSAIDFPWF AKCEFVEYLN HVGLGHIPRL TRVEWGVIRS  660
SLGRPRRFSA QFLKEEKQKL NQYRESVRKH YAELRAGTRE GLPTDLARPL SVGQRVIAIH  720
PKTREIHDGS VLTVDYSRCR VQFDRPELGV EFVMDIECMP LNPVENMPAN LSRHGVTLDK  780
IFGNLNEVKI NGLLKEAKIE DYIKSTSNDK LESTDGSVFI SPSTHHINKL IKQAKVDLGC  840
SNLQTKFGLN ETVGIQQEAS SQLSVLAQIQ AKEADVHALS ELSRALDKKE VVVSELKRLN  900
DEVLENQING DNLLKDSENF KKQYAAVLLQ LNEVNEQVSS ALYSLRQRNT YQGTSPLMFL  960
KPVHDLGDPC SHAQEPGSHV AEIVGSSRAK AQTMIDEAMQ AILALKKRES NLENIEEAID  1020
FVSNKLSVDD LALPTVKSTS ADTSNATPVP QNHFNVGASN PSAANDIVGS KSNSPSDKPE  1080
VEIPSELIAH CVATLLMIQK CTERQFPPAD VAQVLDSAVN SLQPCCPQNL PLYAEIQKCM  1140
GIIRSQILAL IPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	476	506	RKRKQKSSPFKISSKDEDSNDSRVNDTPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein