PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936888.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 290aa MW: 32825.3 Da PI: 4.2396

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936888.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.2	3.2e-11	25	99	1	76
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 +Wt e l+L+++ +e + ++ + ++W+ v++ + + + r+++qC++kwe l ++ ik++e +e+ XP_022936888.1 25 EWTAAECLVLVNVIGAVEADCLKALSSYQKWKIVAEDCTALNVARTSNQCRKKWECLLIEHDVIKQWELTM-PEDD 99 5********************************************************99999999998775.4444 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MKKENGNRGS GVSGSRRTRS QIAPEWTAAE CLVLVNVIGA VEADCLKALS SYQKWKIVAE 60 DCTALNVART SNQCRKKWEC LLIEHDVIKQ WELTMPEDDS YWCLESGRRK ELGLPDNFDE 120 ELFKAIDNVS SMRANQSDTE PDNDPEAAVE NADEISEPGP KRQRRGSMSK RNQGLEKSLE 180 FKEDEEDEAE EQPLLSSPES DLRDCYIKNN GATATDDIEP EEQMMVKKLL ENAENVQEIV 240 SENAECATSD EKNDKDQTNL IRRQGSKLIR CLGDFLNTIN DLRDLLEDCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-46	Trihelix family protein