PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936920.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 273aa MW: 31218 Da PI: 5.3851

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936920.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.2	4.3e-21	100	160	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++ +l +++e++V++WFqNrRa+ k+ XP_022936920.1 100 RQRWTPTPVQLQILERIFDEgNGTPSKQKIKDITLQLiqygQISEANVYNWFQNRRARSKR 160 89***************99************************************97 PP
2	Wus_type_Homeobox	100.8	1e-32	99	162	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it +L +yG+i+++NV++WFQNr+aR+++kq XP_022936920.1 99 ARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQ 162 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEWQNQQQQQ NQTEQLQMQM QVEQLSNAAD GVGGLYVKVM TDEQMELLRQ QISVYASICD 60 QLVEMHKAIT AQQDLAGMRL GNLYCDPIMA CAAGHKITAR QRWTPTPVQL QILERIFDEG 120 NGTPSKQKIK DITLQLIQYG QISEANVYNW FQNRRARSKR KQANSVPNNA DSEPETEVDS 180 PKEKKTKPET LQDYEHFVPK LSNVYPQRSE LGAEILSFDT QTNKGEPMFQ SFGSGHISQM 240 TPTQNHRNNM SNEKMNVPDY SPYSPCEGYH LVE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-71	WOX family protein