PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936978.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 228aa MW: 27657.2 Da PI: 9.1223

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936978.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.1	4.8e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W ++Ed +l v+++G + W++Ia+ g+ R++k+c+ rw++yl XP_022936978.1 14 RGPWLEQEDRQLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+r eE+e++++++k++G++ W++Iar ++ gRt++++k++w+++l XP_022936978.1 67 RDRINSEEEEIILKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRSHL 112 567789**************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MATHSALQTE IQRRGPWLEQ EDRQLTMFVT RMGERKWDSI AKASGLERSG KSCRFRWLNY 60 LRPSLKRDRI NSEEEEIILK LHKKWGNKWS RIARWLPGRT DNEIKNYWRS HLRKKFPIQL 120 EGSWKNLHCK VKHGKPEKLS LRHDQNERDV PLYNHFELSN LEITSSPYET RLSNWISNPL 180 MNEKQEVNHH EECNNSEFCF YYPNMNYARR DDQSDHFWDS LTPLWDIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	2e-46	MYB family protein