PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022936994.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1042aa MW: 117575 Da PI: 6.9338

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022936994.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40	6.7e-13	6	55	7	56
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 t++ql++L +++ +++yp++++ + A+ lgLt rqV+ WF +R +++ XP_022936994.1 6 KTPQQLQALDAFYSEEKYPTQSRLKTYAATLGLTYRQVQGWFSQKRRRDR 55 699*******************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1042 aa Download sequence
MEFRRKTPQQ LQALDAFYSE EKYPTQSRLK TYAATLGLTY RQVQGWFSQK RRRDRSEDET 60 TVSSTGEWLQ ENRRETKVRK VSKQTSSVPV DCCGKMAAPI KTHGIGKGLM TVWQATNPDA 120 GKFPAGINFS GRELMDASSV STSSSEESLR QGKRPPRQAK VKGRQASKVQ GKRKPSTKNR 180 RVERNGEKSQ KQFCYEKCEL AWERKKSQGC IDQFATLVDD EELELRELQS GKHIMASCDH 240 FMANDVNSCS LCKDMLAKFP PNSVKMKQPF GIQSWDSSLD IGKKLFKAFN FLYTYAITLG 300 ICPFTLDEFA QAFYDKNSFL LGKIHMALLK LLFCDIEAEF SNAYLTPLSK SCKFLALVHS 360 LGSQDLALDV WKKSLNPLTW TEILRQVLVA AGFCSKQGAL QKETLSKEMN LMVKYGLQRG 420 TLKGELFIIL SEQGNNGIKV SDLTRESKIV DLNVAGTTEE LELQICSTLS SDITLFEKIS 480 SSAYRVRPSP ATMDVDEIQS DTDFGSVDDI AANASICSSS YDSECDSENL CSQRTKIQKS 540 NNENSTVFME IDVSHPGEAW LLGLMEDEYS GLSIEEKLNA LVALIDLLSY GSSIKPKGTS 600 TSCAIDYASD VRRYGSGAKI KKSSVRGQNL SRSFSTNSGQ LHGASIRYAS LENHPIDSTT 660 TILEFHENSA CQGNGANKMG DAIYLHPMQS VFLGSDRRYN RYWLFLGPCN SSDPGHRRVY 720 FESSEDGHWE VIDTEEALCA LLSVLDDRGK REAYLIESLE KRAAFLCEAM SNYSTRNLVS 780 RSFTQSEQSD MDRIRESSYS PVSDVDNSLN QAETKGNMLP SCSAIVLDVK RKGEEEKQSW 840 NCLQEFDSWV WNFFYHALYA VRHGKRSYLD SLARCESCHD LYWRDEKHCK VCHMTFELDF 900 NLEERYTIHR ATCREKEDDD VFPKHKVLSS QFQSLKAAVH AIESVMPEGA MVGAWTKSAH 960 KLWIKRLRRT SSLTELLQVV ADFVGAINED WFYNFPEGSS VDFRDTLASF ASLPQTTSAL 1020 AFWLVKLDAF LNCFLWKDLK GS

Sequence ? help Back to Top

Protein Sequence Length: 1042 aa Download sequence

MEFRRKTPQQ LQALDAFYSE EKYPTQSRLK TYAATLGLTY RQVQGWFSQK RRRDRSEDET  60
TVSSTGEWLQ ENRRETKVRK VSKQTSSVPV DCCGKMAAPI KTHGIGKGLM TVWQATNPDA  120
GKFPAGINFS GRELMDASSV STSSSEESLR QGKRPPRQAK VKGRQASKVQ GKRKPSTKNR  180
RVERNGEKSQ KQFCYEKCEL AWERKKSQGC IDQFATLVDD EELELRELQS GKHIMASCDH  240
FMANDVNSCS LCKDMLAKFP PNSVKMKQPF GIQSWDSSLD IGKKLFKAFN FLYTYAITLG  300
ICPFTLDEFA QAFYDKNSFL LGKIHMALLK LLFCDIEAEF SNAYLTPLSK SCKFLALVHS  360
LGSQDLALDV WKKSLNPLTW TEILRQVLVA AGFCSKQGAL QKETLSKEMN LMVKYGLQRG  420
TLKGELFIIL SEQGNNGIKV SDLTRESKIV DLNVAGTTEE LELQICSTLS SDITLFEKIS  480
SSAYRVRPSP ATMDVDEIQS DTDFGSVDDI AANASICSSS YDSECDSENL CSQRTKIQKS  540
NNENSTVFME IDVSHPGEAW LLGLMEDEYS GLSIEEKLNA LVALIDLLSY GSSIKPKGTS  600
TSCAIDYASD VRRYGSGAKI KKSSVRGQNL SRSFSTNSGQ LHGASIRYAS LENHPIDSTT  660
TILEFHENSA CQGNGANKMG DAIYLHPMQS VFLGSDRRYN RYWLFLGPCN SSDPGHRRVY  720
FESSEDGHWE VIDTEEALCA LLSVLDDRGK REAYLIESLE KRAAFLCEAM SNYSTRNLVS  780
RSFTQSEQSD MDRIRESSYS PVSDVDNSLN QAETKGNMLP SCSAIVLDVK RKGEEEKQSW  840
NCLQEFDSWV WNFFYHALYA VRHGKRSYLD SLARCESCHD LYWRDEKHCK VCHMTFELDF  900
NLEERYTIHR ATCREKEDDD VFPKHKVLSS QFQSLKAAVH AIESVMPEGA MVGAWTKSAH  960
KLWIKRLRRT SSLTELLQVV ADFVGAINED WFYNFPEGSS VDFRDTLASF ASLPQTTSAL  1020
AFWLVKLDAF LNCFLWKDLK GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	3e-95	HB-other family protein