PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937004.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 598aa    MW: 67565.2 Da    PI: 5.5167
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937004.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.11.1e-2869153187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+laL+++r++++ ++r+++ k+plWe+vs+k+ e g++rs+k+Ckek+en+ k++k+++e +++  +++s+t+++f+qlea
  XP_022937004.1  69 RWPRQETLALLKIRSDLDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTREVRSG--KPDSKTYKFFEQLEA 153
                     8********************************************************************9..58999********85 PP
2trihelix101.19e-32416501187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k ev aLi++r+++e +++++  k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++k r +e+s+tcpyf+ql+a
  XP_022937004.1 416 RWPKVEVEALIKLRTNLEAKYQENVPKGPLWEEISSAMKRIGYNRNAKRCKEKWENINKYFKKVKETRKTR-PEDSKTCPYFHQLDA 501
                     8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MLGDSTTSVL GGGAAVPETN HCHDEVIGDM GVAAAAVEEI NNNSGEEERR RSGGGGGGDD  60
GDRSFGGNRW PRQETLALLK IRSDLDVAFR DASVKGPLWE QVSRKLGELG YHRSAKKCKE  120
KFENVYKYHK RTREVRSGKP DSKTYKFFEQ LEALENHPPF NFNPPPPPPP STTVIPTVPS  180
TTTTTLPHLM NISFSQPNPT IHLPSPPAPF NNPTTSSIPV GFLEADLISN STSDDVDDSS  240
TSSDEAPRRR TKKRKWKEFF ERLMKEVIQK QVEMQKRFLE AIEKREQERI VREEAWRIQE  300
MAKINREREI LAHERSMAAA KDAAITSFLQ KITESQQNNN NHNNNNLSRT PLPPPPPQQQ  360
PIPMSNPTPV VQPPPPPAPP SSSTLQVVLP QKMEIMKMDH NGGENYTMSP SSSSSRWPKV  420
EVEALIKLRT NLEAKYQENV PKGPLWEEIS SAMKRIGYNR NAKRCKEKWE NINKYFKKVK  480
ETRKTRPEDS KTCPYFHQLD ALYREKSGGN NNNNNNRKLE LENIDSSTMI PLMVQPEQQW  540
PPQQEITRPD SGNEEMESEP MDRDDKDDDD DDDEEEEDEG GGNYEIVASK PTSVSTGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247255PRRRTKKRK
2249255RRTKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-131Trihelix family protein