PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937009.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 229aa MW: 25358.1 Da PI: 9.4312

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937009.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	38	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v ++G+++W++I+r++ gR++k+c++rw + XP_022937009.1 38 KGPWSAEEDRVLTRLVDRYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 83 79***************************9.*********985 PP
2	Myb_DNA-binding	53.3	6.6e-17	92	134	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ XP_022937009.1 92 PFSQAEDDAIIAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 134 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MDIQNSSYSS STSESYSSDS SHSGKPSPVN SAVPDKIKGP WSAEEDRVLT RLVDRYGPRN 60 WSLISRYVKG RSGKSCRLRW CNQLCPGVEH HPFSQAEDDA IIAAHARYGN RWATIARLLP 120 GRTDNAVKNH WNSTLKRRVR NDRKSAGNRT SDVGGGSLVG VNDDPLTELT LATPGMGAGG 180 EVAVESDRRR ESMPAGFWEA MRDVVAREVR EYMTTTFSEN PGFIKNERG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-55	MYB family protein