PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937036.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 235aa    MW: 25958.5 Da    PI: 7.5106
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937036.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-0879126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+  Rdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  XP_022937036.1  79 SKACREKFWRDRLNDKFLELGSILDPG---RLPKTDKAAILVDAVRMVNQL 126
                     67789*********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVSAENPNWL FDYSLIDDTP VPNANFPVTS SSFSWAVQPF NGFPDAGVEI DGSLADLDGR  60
LESGSKKRVR SESCSASSSK ACREKFWRDR LNDKFLELGS ILDPGRLPKT DKAAILVDAV  120
RMVNQLRSEA RKLKESNSSL QEKIKELKAE KNELHDGKQK LKADKEQLEQ QVKSMPAQPG  180
FLPPPPIPTF ASQGQAPGNK LVLFVGYHPG VTMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-79bHLH family protein