PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937038.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 204aa    MW: 22716.3 Da    PI: 10.4843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937038.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-084895454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++  rE+  Rdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  XP_022937038.1 48 SKACREKFWRDRLNDKFLELGSILDPG---RLPKTDKAAILVDAVRMVNQL 95
                    67789*********************8...89***************9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MRIFRSRVQA SPGLFSPLMA SLMPDLDGRL ESGSKKRVRS ESCSASSSKA CREKFWRDRL  60
NDKFLELGSI LDPGRLPKTD KAAILVDAVR MVNQLRSEAR KLKESNSSLQ EKIKELKAEK  120
NELHDGKQKL KADKEQLEQQ VKSMPAQPGF LPPPPIPTFA SQGQAPGNKL VLFVGYHPGV  180
TMWQFMPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-69bHLH family protein