PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937063.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 318aa    MW: 35269.5 Da    PI: 5.5924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937063.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-102442841055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022937063.1 244 RKRRERINERLRILQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 284
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDSFGGLGGE GEWDLCSSIL SMEELDFTPL IPPPTAEMPD WFCHLDSFTP NLPSCGNAID  60
QFPCIAAADH YMSMSNAAIE ENKMDSIFSA CTDVLLQEIS VFSGEDRYLN MDVQTQIGND  120
HNATNSAKAF HHKRKSIVVA DDDHHHNNLN NPTKKIRTSN NKIRKATPNS NKKLSTRRRK  180
CEEDQESGGP DMNSCSSANS SEDDSASQDT NGGGAVLEGE ASPPKAKTRA TRGSATDPQS  240
LYARKRRERI NERLRILQKL VPNGTKVDIS TMLEEAVHYV KFLQLQIKLL SSDEMWMYAP  300
IAYNGMDIGL HQKLPSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.16e-41bHLH family protein