PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937149.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 765aa MW: 84506.9 Da PI: 4.5276

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937149.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13	0.00019	558	595	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022937149.1 558 RQQIQDRIKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 595 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MGETELGLVL NRICSGNRWS YGVFWSFDRR NSMLLTLEDF WYEEQVGLVA TNMLQQVHML 60 GEGVIGTAAF TGKHRWVFSD AYVGVWSSAM FQDNLEFEQQ FFCGIKTVAV IPVQPYGVLQ 120 LGSTHKISES LEFLADTKKS LCRVHEETTP VASSTDICHV NELFTSIVSS TNSDDWSLSA 180 MHTNFSGKSY ASTDKQPVYD TSCFSKSSEN SVLTSSEPLP TSDVREQDAQ YPSYSDANML 240 ESCRNETEYG NNSTIFTSVS SGIGSLPIDN VEPSSQLLPM NEGELIDSIT SLPDFCDERL 300 TEDFIINLPN ISSVDDLFQW FDSSPEIGTD GVTTALNHSL PTGVSTLSSN LVEARKFEDD 360 PSKTSVVSAQ SLITNGQDMQ DTKDRLFDSL GLATGCPVVK TWDNIVTEAH GSYSSGCNSM 420 STCTSKLATG SLDLPRKRLF WELGIEELLD GLSNTSSATK SSIENHQTIA SKRSKIERSS 480 LDRCIDVNLT QPLCTVDSFP STNEAVPKSQ VSSWIDDSYS INIGGSILEP SHKSEEAAKT 540 FKKRARPGES NRPRPKDRQQ IQDRIKELRG IIPSGAKCSI DSLLDRTIKY MLFLQSVTKY 600 ADKLKETNEP KLIDQENGVG ISDKCTTERG GGGVTWAFKM GSTPMVCPVI VEDLSSPGQM 660 LIEMLCEERG FFLEIAEMIR SYGLTILKGV MEVREEKIWA QFVVEVKLNA NRSVTRINVF 720 VSLMELLQQA NIGGAEIANE SSNVPIMDSF DKAITQSGYA YMKSR

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MGETELGLVL NRICSGNRWS YGVFWSFDRR NSMLLTLEDF WYEEQVGLVA TNMLQQVHML  60
GEGVIGTAAF TGKHRWVFSD AYVGVWSSAM FQDNLEFEQQ FFCGIKTVAV IPVQPYGVLQ  120
LGSTHKISES LEFLADTKKS LCRVHEETTP VASSTDICHV NELFTSIVSS TNSDDWSLSA  180
MHTNFSGKSY ASTDKQPVYD TSCFSKSSEN SVLTSSEPLP TSDVREQDAQ YPSYSDANML  240
ESCRNETEYG NNSTIFTSVS SGIGSLPIDN VEPSSQLLPM NEGELIDSIT SLPDFCDERL  300
TEDFIINLPN ISSVDDLFQW FDSSPEIGTD GVTTALNHSL PTGVSTLSSN LVEARKFEDD  360
PSKTSVVSAQ SLITNGQDMQ DTKDRLFDSL GLATGCPVVK TWDNIVTEAH GSYSSGCNSM  420
STCTSKLATG SLDLPRKRLF WELGIEELLD GLSNTSSATK SSIENHQTIA SKRSKIERSS  480
LDRCIDVNLT QPLCTVDSFP STNEAVPKSQ VSSWIDDSYS INIGGSILEP SHKSEEAAKT  540
FKKRARPGES NRPRPKDRQQ IQDRIKELRG IIPSGAKCSI DSLLDRTIKY MLFLQSVTKY  600
ADKLKETNEP KLIDQENGVG ISDKCTTERG GGGVTWAFKM GSTPMVCPVI VEDLSSPGQM  660
LIEMLCEERG FFLEIAEMIR SYGLTILKGV MEVREEKIWA QFVVEVKLNA NRSVTRINVF  720
VSLMELLQQA NIGGAEIANE SSNVPIMDSF DKAITQSGYA YMKSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	7e-50	bHLH family protein