PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937225.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 365aa    MW: 40033.7 Da    PI: 6.711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937225.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20181230255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_022937225.1 181 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 230
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MVTAMDFYNE GPQTDHFGGE LMEAILPFMK VASSLSTNLP SSSSSSSSSS SSSSSLSPAP  60
YLPPCTNNHL SFSHSAPQQS TLYSNGCSTS MNPEFSNGFS TQNLVGFEQP FTIGPYQLSL  120
PQNLQSQPQV NLLQNQTPLP FALEQQNHQP LPCYEQITPN FLSPKPTPMK QVGSSSKPTK  180
LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA YDKAAFKLRG DSARLNFPHL  240
KHQGSCVEGE FGEYNPLHSS VDAKLQAICD NLAKPQKQGN SKKPVTAAKK SRSQSCSLAD  300
TAAVKVENSS SRAVTESDGS AASSPLSDLS FPDFTEMPWD QNLAWETSML EKYPSEIDWA  360
SILPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-64ERF family protein