PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937226.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 354aa    MW: 39049.7 Da    PI: 6.711
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937226.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20170219255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_022937226.1 170 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 219
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVTAMDFYNE GPQTDHFGGE LMEAILPFMK VASSLSTNLP SSSSSSPAPY LPPCTNNHLS  60
FSHSAPQQST LYSNGCSTSM NPEFSNGFST QNLVGFEQPF TIGPYQLSLP QNLQSQPQVN  120
LLQNQTPLPF ALEQQNHQPL PCYEQITPNF LSPKPTPMKQ VGSSSKPTKL YRGVRQRHWG  180
KWVAEIRLPR NRTRLWLGTF DTAEEAALAY DKAAFKLRGD SARLNFPHLK HQGSCVEGEF  240
GEYNPLHSSV DAKLQAICDN LAKPQKQGNS KKPVTAAKKS RSQSCSLADT AAVKVENSSS  300
RAVTESDGSA ASSPLSDLSF PDFTEMPWDQ NLAWETSMLE KYPSEIDWAS ILPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-64ERF family protein