PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937362.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 506aa MW: 54512.5 Da PI: 9.7072

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937362.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	205	249	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l av+++G g+W+ I + g Rt+ q+ rw XP_022937362.1 205 RKPWSKTEDLELMAAVEKYGEGNWANILKadFKG-DRTASQLSQRW 249 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MIEMKEKQKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN 60 VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI 120 ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIQRQPL 180 PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR 240 TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NNSKSANSNM 300 NSSTVSSTSG AEAPVQIQNQ SPQVLVPSRP LQVKPLPSAA KSGINTAKNT LMMKSTHNSD 360 SIVRATAVAA GARIVSPSDA ASLMKAAQTK NAIHIKSKCV SSIQPPMLGN ASTHLDARPS 420 VHYISTGRTA TPGANYVGGK STMAGNNSMK YVSPKAPYNC STAVLTNPPS NQISPTTESP 480 LKQEVKSSEE GKISKPIITP KGDFRE

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MIEMKEKQKK GTISNEDSSA VLERYSVRTI FTLLREVAHV SEVRIDWDKL VKNTSTGISN  60
VREYQLLWRH LAYRHTLLEN VDSVTDPLDY DSDLDFEIEP FPSVSNESLN EAAACVKVLI  120
ANGIPSESDV PSSSVVEAPL TIGISSNSRS FRASLENPQS ACLMQGMYVT VPISIQRQPL  180
PTPSATEVFD VNGAAGSNAA SRKRRKPWSK TEDLELMAAV EKYGEGNWAN ILKADFKGDR  240
TASQLSQRWS IIRKRHGNLN VGANTTSTQI SKAQIDAAHR ALSLALDLPV NNSKSANSNM  300
NSSTVSSTSG AEAPVQIQNQ SPQVLVPSRP LQVKPLPSAA KSGINTAKNT LMMKSTHNSD  360
SIVRATAVAA GARIVSPSDA ASLMKAAQTK NAIHIKSKCV SSIQPPMLGN ASTHLDARPS  420
VHYISTGRTA TPGANYVGGK STMAGNNSMK YVSPKAPYNC STAVLTNPPS NQISPTTESP  480
LKQEVKSSEE GKISKPIITP KGDFRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	4e-67	MYB_related family protein