PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937461.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 949aa MW: 106500 Da PI: 9.0729

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937461.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 rW+t E e++++a +++G + Wk++a+ gR+ +++ XP_022937461.1 46 RWSTREIEIFYEAYRKYGQD-WKKVASSTY-GRSIEMV 81 9***************99.***9998.9988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MAPPKKSTSR NKRILHSNNP SAEKSYTSSQ RSKKRKKNLC EKLGPRWSTR EIEIFYEAYR 60 KYGQDWKKVA SSTYGRSIEM VEALYNMNRA YLSLPEGTAS VVGLIAPMTD YYNVMEGRDS 120 ERDNYHASGF QESPKTNQGK VQMSFSNEDY CTSHSVAANG GCLSLLRSLY NGSQPRVVQK 180 RTPRVPISYS NKRNEWKNHA SGNESSKKSE FHVSSDEVAH GATLALAEAS QRGGTSTTSM 240 PCKIKENLKS SYEVSGGRKG RPIEQFSYDP SLMVDIESAR TVKAHHKMKK RYRKEKVLDD 300 KDRQFHQSVD YLTENRPEAP IMDGVGSLSV PEGKVDSEIS NADCELSFPL VQKKKSRKQS 360 RGDGNIAVDA LQTLADLSSV MPITAMEPEA SVQIVEETDS FNLENKSCIE DKAKQVMVPE 420 TLNIEDTGYG KSKPGSGLSI VIPDTKIPVD AHLPENLKTA TSGHIKPMNN ENQVTLPIKQ 480 GSRSRCKMGL RRLLTHQKTK PCDDKLEKEL MKYSPSVQDR AFFLKDKLSN CMSSTLVRRW 540 CTFEWFYSAI DYPWFARREF VEYLNHVGLK NIPRLTRLEW SVIRSSLGKP RRLSEFFLHG 600 ERMKLKLFRE STRKIYADLR AGSREGLPTD LARPLTVGQR VIALLPNTLK VLDGMVLTVN 660 HDKYRIQFDN QEIGVELVMD FDCMPFNPRD NLPVALRCQS RSTNKPPLAC KEPKANSHPN 720 LSRELEKASS PYTIDTLVPC TTFNLAQHNT FPGNSLPLWS MAPSLANTRA PSSIPHSLNV 780 SHELGCGVVD IVRGSREKAQ LMVNVAIEVM LSTSQGDDPL TIICGALHSF ESFEYQKPLS 840 KSQEYINDSL GPFNQLCSLE HLSTSDLISP RSRRSDKDYG GIPSNLITSC VATLLMIQAC 900 VEYPYPPGDV AQILGLAVKS LHPRCSQNLH FYKEIETCIG RICSNLNSI

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MAPPKKSTSR NKRILHSNNP SAEKSYTSSQ RSKKRKKNLC EKLGPRWSTR EIEIFYEAYR  60
KYGQDWKKVA SSTYGRSIEM VEALYNMNRA YLSLPEGTAS VVGLIAPMTD YYNVMEGRDS  120
ERDNYHASGF QESPKTNQGK VQMSFSNEDY CTSHSVAANG GCLSLLRSLY NGSQPRVVQK  180
RTPRVPISYS NKRNEWKNHA SGNESSKKSE FHVSSDEVAH GATLALAEAS QRGGTSTTSM  240
PCKIKENLKS SYEVSGGRKG RPIEQFSYDP SLMVDIESAR TVKAHHKMKK RYRKEKVLDD  300
KDRQFHQSVD YLTENRPEAP IMDGVGSLSV PEGKVDSEIS NADCELSFPL VQKKKSRKQS  360
RGDGNIAVDA LQTLADLSSV MPITAMEPEA SVQIVEETDS FNLENKSCIE DKAKQVMVPE  420
TLNIEDTGYG KSKPGSGLSI VIPDTKIPVD AHLPENLKTA TSGHIKPMNN ENQVTLPIKQ  480
GSRSRCKMGL RRLLTHQKTK PCDDKLEKEL MKYSPSVQDR AFFLKDKLSN CMSSTLVRRW  540
CTFEWFYSAI DYPWFARREF VEYLNHVGLK NIPRLTRLEW SVIRSSLGKP RRLSEFFLHG  600
ERMKLKLFRE STRKIYADLR AGSREGLPTD LARPLTVGQR VIALLPNTLK VLDGMVLTVN  660
HDKYRIQFDN QEIGVELVMD FDCMPFNPRD NLPVALRCQS RSTNKPPLAC KEPKANSHPN  720
LSRELEKASS PYTIDTLVPC TTFNLAQHNT FPGNSLPLWS MAPSLANTRA PSSIPHSLNV  780
SHELGCGVVD IVRGSREKAQ LMVNVAIEVM LSTSQGDDPL TIICGALHSF ESFEYQKPLS  840
KSQEYINDSL GPFNQLCSLE HLSTSDLISP RSRRSDKDYG GIPSNLITSC VATLLMIQAC  900
VEYPYPPGDV AQILGLAVKS LHPRCSQNLH FYKEIETCIG RICSNLNSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	37	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-134	MYB_related family protein