PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937478.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 249aa    MW: 27384.3 Da    PI: 4.6126
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937478.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.6e-1853102255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_022937478.1  53 IYRGVRMRV-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAALTIKG 102
                     69****999.**********854...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MANATVPETD LGGVNSSPSS SSSSSRPKQG GTQLKRGREN SSSSSNDNNR HPIYRGVRMR  60
VWGKWVSEIR EPKKKSRIWL GTFATPEMAA RAHDVAALTI KGNSAILNFP ELAASFPRPV  120
SSSPRDVQFA AGLAASMQLP NVDPPPPPPP LSPSSQSPSP PLSSSSELDE STPEELSEIV  180
KLPSLGTSYE ESGEFVCDEW QYSCGPWYQN QSRREEEEEE AYEYFRDQMV MAETECVIPA  240
SFQPLPFSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-50ERF family protein