PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937653.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 238aa MW: 27717 Da PI: 7.5384

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937653.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l ++v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_022937653.1 14 NLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60 56*******************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022937653.1 66 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 67799***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MEESKAMKQQ AKKNLWKPEE DLILRNYVET HGEGNWATVS QESGLMRGGK SCRLRWKNYL 60 RPNIKRGGMS KEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKNGLQDKR 120 KVNESSSCKK KDEDDGNNKK QKKVINQTSY PQPQMCSDNW ANQAHDIQRR NQEENREVTD 180 LWNMDDITSS HYNINCPMVP ANNATFNFDD EPHFNHLDPF FLIEAFGCSS VDASLENM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	7e-64	MYB family protein