PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022937836.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 418aa MW: 44211.5 Da PI: 8.1903

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022937836.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.6e-12	227	272	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022937836.1 227 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 272 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MRLTNSLPDL HSNRRNRPPE TDASQLHHHQ NHLQASHLHP SSFSSDDFLD QILSSIPLPW 60 ELPTGLPNPH SNLPPQPPQL PRNPDNAAFQ IGDTTPAAKM AMAMLHQQLL TTAADSSLLT 120 LPGNDVVEVE GSSSFKCPNP IIVDGSVNPS LFNEFTGFLN ASGSSHSHTL NQSQGNSTST 180 SQTQSFGAPV SANTPPPVGT GSGGGASAAA QPRQRVRARR GQATDPHSIA ERLRRERIAE 240 RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGATASM PSQLVADMSS 300 HSEGGIHNQS NGTGGAAGQT FAGAPASNDT MTVTEHQVVK LMEKDMGSAM QYLQGKGLCL 360 MPISLATAIS TATCHSRPVT ASRGGGDRPT SPSLSALTVQ STALRNGTVK DKASISRP

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MRLTNSLPDL HSNRRNRPPE TDASQLHHHQ NHLQASHLHP SSFSSDDFLD QILSSIPLPW  60
ELPTGLPNPH SNLPPQPPQL PRNPDNAAFQ IGDTTPAAKM AMAMLHQQLL TTAADSSLLT  120
LPGNDVVEVE GSSSFKCPNP IIVDGSVNPS LFNEFTGFLN ASGSSHSHTL NQSQGNSTST  180
SQTQSFGAPV SANTPPPVGT GSGGGASAAA QPRQRVRARR GQATDPHSIA ERLRRERIAE  240
RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGATASM PSQLVADMSS  300
HSEGGIHNQS NGTGGAAGQT FAGAPASNDT MTVTEHQVVK LMEKDMGSAM QYLQGKGLCL  360
MPISLATAIS TATCHSRPVT ASRGGGDRPT SPSLSALTVQ STALRNGTVK DKASISRP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	237	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-62	bHLH family protein