PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022937855.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 853aa    MW: 93161.9 Da    PI: 6.1822
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022937855.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.2e-183087457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L + +    +++ +q+kvWFqNrR +ek+
  XP_022937855.1 30 YVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCpilaNIEPKQIKVWFQNRRCREKQ 87
                    5789****************************************************97 PP
2START1563e-491713782204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee ++++++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++    e+l+d++ W ++++++e+  +  +g  g+++l 
  XP_022937855.1 171 IAEEILAAFLSKATGTAIDWVQMPGMKPGPDSVGIFAVSQSCSGVAARACGLVSLEPM-KIDEILKDRPSWFRDCRSVEVFTTFPTGngGTIELV 264
                     789999****************************************************.8999999999*****************999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+++l+ g ++++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +lk +++++++r+l+
  XP_022937855.1 265 YTQVYAPTTLAPaRDFWTLRYTKTLENGNLAVCERSLSGSGTGPNsasAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLKPWSVPEVVRPLY 359
                     *************************************98877777688999******************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ a ++k++ a++++ +
  XP_022937855.1 360 ESSKAVAQKMTIAAFRYVR 378
                     *************998865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 853 aa     Download sequence    
MAMAMATATA HHRESGDGGI DGHLDSTGKY VRYTTEQVEA LERVYAECPK PSSLRRQQLV  60
RDCPILANIE PKQIKVWFQN RRCREKQRKE ASRLQSLNSK LTAMNKLLME ENDRLQKQVS  120
QLVCENGSMR QHLQTANAAA APITDASCDT VATAPQHSLR DASSPAGLLS IAEEILAAFL  180
SKATGTAIDW VQMPGMKPGP DSVGIFAVSQ SCSGVAARAC GLVSLEPMKI DEILKDRPSW  240
FRDCRSVEVF TTFPTGNGGT IELVYTQVYA PTTLAPARDF WTLRYTKTLE NGNLAVCERS  300
LSGSGTGPNS ASAAQFVRAE MLPSGYLIRP CDGGGSIIHI VDHLNLKPWS VPEVVRPLYE  360
SSKAVAQKMT IAAFRYVRQV AQETSGEVVY SLGRQPAVLR TFSQRLSRGF NEAVNGFNDD  420
GWSLMNCDGA EDVSLAINSS KNVNTSYDPV NSLAFHAGVL CAKASMLIQN VPPIALIRFL  480
REHRSEWADF NVDAYSAASL KTGSYVYPGM RPTRFTGSQI IMPLGHTIEQ EELLEVVRLE  540
SHPLAQEDTF MSRDVHLLQM CTGIDENAVG ACSELVFAPI NEMFPDDAVL LPSGFRIIPL  600
HSETGDSKHT WKNSNRTMDL TSNLEVGSSA SQDAAAAAAS TSNFRSVLTI AFQFSFGSNL  660
QDDVAAMARQ YVRSVVSAVQ RVAVAISPSG LSLPSERRLS SACPEALTLA RWICYSYRCH  720
TGTELVLSDS VDGDSVLKHL WNHQDAILCC SLKSLPPVFM FANQAGLDML ETTLVALQDI  780
TLDKILGDSA LKAFSADFSN LMHQGFAYIP AGICISTMGR HASFEQAIAW KVLAEDESTV  840
HCLAFSFVNW SFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein