PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938116.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 453aa MW: 50261.1 Da PI: 7.2418

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938116.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.5	2.3e-35	45	189	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022938116.1 45 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 137 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022938116.1 138 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT 180 NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGSGAGGIGE VTGDNVVLSS 240 RRESGSGSCS SSREMTTPRD EMSPVGGGGG SGGLCPPPHI AVTYGGLDHI QQFKADHFGF 300 GSFRRNFDEV GIGEASTTRE SAPTEDIGDH HRHHHLQRQH HHPMATTAFQ ITRPSNPIST 360 IICPPPLHHS SIILDHDSYR VSPLILQNES FQQQQQHHHK LGGRSASGLE ELIMGCTSSN 420 IKEESTMGSN AQEAAEWMKY SPFWPDPDNP NHH

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MKSSLGSITS SDLIDAKLEE HQKCGSKQCP GCGHKLEAKP DWLGLPAGVK FDPTDQELIE  60
HLEAKVEAKN DIKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDFQGGGE TRWHKTGKTR PVMASGRQKG CKKILVLYTN FGKNRKPEKT  180
NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSSAE KGSGAGGIGE VTGDNVVLSS  240
RRESGSGSCS SSREMTTPRD EMSPVGGGGG SGGLCPPPHI AVTYGGLDHI QQFKADHFGF  300
GSFRRNFDEV GIGEASTTRE SAPTEDIGDH HRHHHLQRQH HHPMATTAFQ ITRPSNPIST  360
IICPPPLHHS SIILDHDSYR VSPLILQNES FQQQQQHHHK LGGRSASGLE ELIMGCTSSN  420
IKEESTMGSN AQEAAEWMKY SPFWPDPDNP NHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-138	NAC family protein