PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022938118.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 441aa MW: 48964.5 Da PI: 7.3363

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022938118.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	33	177	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 lp+G++F+Ptd+el+ e+L++kve+k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022938118.1 33 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdfqg 125 799**********.99***9987775553333333766646******.555666799**************7555555544 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022938118.1 126 GGETRWHKTGKTRPVMA-SGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 177 33778********.9999******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MPSLRSIKSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI 60 KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE 120 CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH 180 EEEKEGELVV SKIFYQTQPR QCNWSSAEKG SGAGGIGEVT GDNVVLSSRR ESGSGSCSSS 240 REMTTPRDEM SPVGGGGGSG GLCPPPHIAV TYGGLDHIQQ FKADHFGFGS FRRNFDEVGI 300 GEASTTRESA PTEDIGDHHR HHHLQRQHHH PMATTAFQIT RPSNPISTII CPPPLHHSSI 360 ILDHDSYRVS PLILQNESFQ QQQQHHHKLG GRSASGLEEL IMGCTSSNIK EESTMGSNAQ 420 EAAEWMKYSP FWPDPDNPNH H

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MPSLRSIKSA DQSSAQGADT SLKPSRVQDW LGLPAGVKFD PTDQELIEHL EAKVEAKNDI  60
KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF HRPSKAYTTG TRKRRKIQTE  120
CDFQGGGETR WHKTGKTRPV MASGRQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH  180
EEEKEGELVV SKIFYQTQPR QCNWSSAEKG SGAGGIGEVT GDNVVLSSRR ESGSGSCSSS  240
REMTTPRDEM SPVGGGGGSG GLCPPPHIAV TYGGLDHIQQ FKADHFGFGS FRRNFDEVGI  300
GEASTTRESA PTEDIGDHHR HHHLQRQHHH PMATTAFQIT RPSNPISTII CPPPLHHSSI  360
ILDHDSYRVS PLILQNESFQ QQQQHHHKLG GRSASGLEEL IMGCTSSNIK EESTMGSNAQ  420
EAAEWMKYSP FWPDPDNPNH H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-118	NAC family protein